Oxbow makes genomic data ready for high-performance analytics.
Exon is an OLAP query engine specifically for biology and life science applications.
Rust crates for working with Workflow Description Language (WDL) documents.
High-performance UMI tools for NGS data analysis
Command line utility for working with next-generation sequencing files.
A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
A Similarity-Guided Alignment Algorithm
less like viewer for fastq files
High-performance FASTQ/FASTA quality analysis tool written in Rust — HTML reports, adapter trimming, k-mer analysis, N50/N90, duplication estimation, and real-time TUI
NGS read simulator
Rust FFI crate for bwa-mem3 with packed-BAM output and caller-owned parallelism
Evaluate the effectiveness of baits in a hybrid selection panel
A drop-in replacement for UMI-tools, written in Rust. Same flags, same output - 14-91x faster.
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